[1] "aircoa_conc_days starting loo 090201 090228" [1] "Thu Dec 02 12:13:09 2010" [1] "Reading data from file loo_090201.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090201.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090202.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090202.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090203.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090203.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090204.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090204.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090205.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090205.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090206.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090206.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090207.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090207.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090208.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090208.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090209.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090209.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090210.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090210.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090211.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090211.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090212.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090212.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090213.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090213.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090214.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090214.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090215.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090215.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090216.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090216.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090217.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090217.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090218.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090218.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090219.out" Read 420 records [1] "Removed 90 record(s) with sample flow < 70 from loo_090219.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 395 399 404 408 412 [1] "Reading data from file loo_090220.out" Read 393 records [1] "Removed 85 record(s) with sample flow < 70 from loo_090220.out at:" [1] 2 6 10 14 19 23 28 32 36 40 45 49 54 58 62 72 76 80 84 [20] 89 93 98 102 106 110 115 119 124 128 132 142 146 150 154 159 163 168 172 [39] 176 180 185 189 194 198 202 212 216 220 224 229 233 238 242 246 250 255 259 [58] 264 268 272 282 286 290 294 299 303 308 312 316 320 325 329 334 338 342 352 [77] 356 360 364 369 373 378 382 386 390 [1] "Reading data from file loo_090221.out" Read 127 records [1] "Removed 5 record(s) with Li-820 temperature anomaly > 0.5 C from loo_090221.out at:" [1] 1 2 3 4 5 [1] "Removed 21 record(s) with sample flow < 70 from loo_090221.out at:" [1] 2 8 13 18 29 34 39 44 50 55 61 66 71 76 82 87 93 98 103 [20] 114 119 [1] "Read in a total of 6679 records." [1] "Applying clock drift corrections" Read 1 record [1] "Reading calibration data" Read 1 record Read 1 record Read 1 record Read 1 record Read 1 record [1] "Concentration and Time Dependent Pressure Smoother" [1] "pcorr = -0.045 + -0.014 * doy + 0 * doy^2 + 0.001973 * (co2i-avconc) ppm/kPa" [1] "Temperature Smoother" txdat ctxdat 69.89293311 0.04048795 -1.34282594 [1] "tcorr = 0.04 ppm/boxC + -1.343 ppm/cellC" [1] "Flushing Effect" [1] "fcorr = -0.00045 ppm/ppm" [1] "fcor not applied" [1] "Time-dependent 4-Point Calibration" [1] "Plotting Fit Parameters" [1] "Plotting Average Fits" [1] "High-Rate Zero Offsets" [1] "Plotting Calibration Values" [1] "Plotting Fit Parameters in ppm" [1] "Reading Inlet Data" Read 1 record [1] "maxlin 5" [1] "midlin 3" [1] "Calculating Time-Dependent Time Lags" [1] "Writing Data" [1] "Interpolating to 15 Minutes" [1] "Averaging to 60 Minutes" [1] "Calculating Mean Diurnal Cycles at 15-min Resolution" [1] "Calculating Diurnal Cycles of CO2-sigma Quantiles at Hourly Resolution for Highest Inlet" [1] "Plotting Full Timeseries" [1] "Plotting Diurnal Cycles" [1] "Plotting Weekly Timeseries" [1] "Plotting High Side Cylinder Pressures" Read 5 records Read 1 record [1] "Updating Complete Timeseries from: 071001 to 101130" [1] "Thu Dec 02 12:14:21 2010" Read 2929 records Read 14077 records Read 15785 records Read 14045 records Read 14782 records Read 15810 records Read 15113 records Read 15810 records Read 15269 records Read 15810 records Read 15810 records Read 15172 records Read 15682 records Read 13196 records Read 12259 records Read 7189 records Read 9019 records Read 13018 records Read 14871 records Read 15082 records Read 15682 records Read 14596 records Read 13125 records Read 15475 records Read 13488 records Read 15417 records Read 7724 records Read 7228 records Read 15284 records Read 15171 records Read 15682 records Read 15172 records Read 15802 records Read 15807 records Read 15266 records Read 6109 records Error in file(file, "r") : unable to open connection Calls: arun -> accncdys -> data.frame -> scan -> file In addition: Warning messages: 1: In lsfit(hiside$rcjul[sel & hiside$rcjul > hs2inst], hiside$hs2p[sel & : 2 missing values deleted 2: In lsfit(hiside$rcjul[sel & hiside$rcjul > hs1inst], hiside$hs1p[sel & : 2 missing values deleted 3: In lsfit(hiside$rcjul[sel & hiside$rcjul > ls1inst], hiside$ls1p[sel & : 2 missing values deleted 4: In lsfit(hiside$rcjul[sel & hiside$rcjul > ls2inst], hiside$ls2p[sel & : 2 missing values deleted 5: In lsfit(hiside$rcjul[sel & hiside$rcjul > ltinst], hiside$ltp[sel & : 2 missing values deleted 6: In file(file, "r") : cannot open file 'loo_071001_071031.mes', reason 'No such file or directory' Execution halted